CDS

Accession Number TCMCG017C25250
gbkey CDS
Protein Id OMO72291.1
Location complement(join(28493..28561,28714..28956,29043..29141,29249..29728,29814..29912,30555..30676,30845..30886,31399..31567,32583..32639,32718..32860,32962..33106,33629..33790,33953..34138,34581..34673,34777..34937,35095..35199,35625..35919))
GeneID InterPro:IPR000573
Organism Corchorus olitorius
locus_tag COLO4_27710

Protein

Length 889aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01019668.1
Definition Aconitase A/isopropylmalate dehydratase small subunit, swivel [Corchorus olitorius]
Locus_tag COLO4_27710

EGGNOG-MAPPER Annotation

COG_category AJ
Description Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
KEGG_TC -
KEGG_Module M00009        [VIEW IN KEGG]
M00010        [VIEW IN KEGG]
M00012        [VIEW IN KEGG]
M00173        [VIEW IN KEGG]
M00740        [VIEW IN KEGG]
KEGG_Reaction R01324        [VIEW IN KEGG]
R01325        [VIEW IN KEGG]
R01900        [VIEW IN KEGG]
KEGG_rclass RC00497        [VIEW IN KEGG]
RC00498        [VIEW IN KEGG]
RC00618        [VIEW IN KEGG]
BRITE br01601        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01681        [VIEW IN KEGG]
EC 4.2.1.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00020        [VIEW IN KEGG]
ko00630        [VIEW IN KEGG]
ko00720        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
ko01210        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00020        [VIEW IN KEGG]
map00630        [VIEW IN KEGG]
map00720        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
map01210        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003994        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005507        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005618        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006101        [VIEW IN EMBL-EBI]
GO:0006102        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016835        [VIEW IN EMBL-EBI]
GO:0016836        [VIEW IN EMBL-EBI]
GO:0016999        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030312        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042594        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072350        [VIEW IN EMBL-EBI]
GO:0090351        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1990641        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTATATAACGGCCTCATCGTCGGTTTCTTCCTCTCTCTTGAGAGCGGCTTCATCATATTCACGCTCTCGCTTCTTCACTTCTTCCTTTCGGAATCTCACTTCGAACACTCCCGCCTCTCCTTCCGTCGTTGGCCAATACCGATCTCTTTCTACCGCCGCCTTTCGTTCCTTCCACGGCTCTGTCCCACGGTGGAGCCACCGGCTTGATTGGAGATCCCCTGTTAGCCTCCGTGCTCAGATCAGAACCGTTTCACCTGCCATCGAACGATTGGAGAGGAAGTTTTCTACTATGGCTTCTGAACATCCTTTCAAGGCAGTTTTGACCAGTCTTCCCAAGCCAGGTGGTGGCGAGTTTGGAAAGTTCTATAGCTTGCCTGCCCTGAATGATCCGAGGATCGATAAACTACCATATTCTATCAGAATTTTGCTTGAATCTGCGGTGCGTAATTGTGACAACTTCCAAGTGAAGAAGGAAGATGTTGAGAAAATCATTGATTGGGCAAATACATCACCCAAGCAAGTCGAAATCCCCTTCAAGCCTGCTCGTGTCCTCTTGCAGGATTTTACAGGAGTGCCAGCTGTGGTCGACCTTGCTTGTATGCGTGATGCAATGAACAAGCTTGGCAGTGATACAAGCAAGATTAATCCTTTGGTTCCAGTAGATCTTGTCATTGATCATTCAGTTCAAGTTGACGTAACAAGATCAGAAAATGCAGTGCAAGCCAACATGGAGCTTGAGTTTCAGAGGAACAAAGAAAGATTTTCTTTCCTTAAGTGGGGATCCACTGCTTTCCATAATATGCTTGTCGTTCCTCCCGGTTCTGGTATTGTGCATCAGGTTAATCTTGAATATCTTGGACGGCTTGTATTCAACACTGATGGCCTGCTCTACCCTGATAGCGTTGTCGGAACTGATTCTCATACAACTATGATAGATGGCCTAGGAGTTGCTGGCTGGGGTGTTGGAGGTATTGAAGCTGAGGCTGCCATGCTTGGTCAGCCCATGAGCATGGTCTTACCTGGTGTTGTTGGATTCAAGTTATCTGGAAAATTAAAAAATGGTGTGACAGCTACAGACTTAGTTCTGACTGTGACACAGATGCTGAGGAAGCATGGTGTTGTTGGCAAATTTGTTGAGTTCTATGGGGATGGGATGGGTGAACTATCACTGGCTGACAGGGCTACCATTGCTAATATGTCTCCTGAGTATGGTGCAACCATGGGATTCTTCCCTGTAGATCATGTTACTTTGCAGTATCTTAAATTGACTGGCAGAAGTGATGATACTGTTGCAATGATAGAAGCATACCTCCGTGCAAATAAGATGTTCGTTGATTACAGTGAGGGCTTTGCTGTGCCAAAAGAAGCACAGGACAGAGTGGCAAAATTTTCATTCCATGGGCAGCCAGCAGAGCTTAAGCATGGCAGTGTCGTGATTGCTGCTATTACAAGCTGCACCAATACATCAAACCCTAGTGTTATGCTTGGAGCTGGTCTTGTTGCAAAAAAGGCTTGGGAGTTGGATGAGTCAGTTGCCGCTGCTATTTCAGAAAATGACATTCTAGCAGCTGCTGTGCTTTCTGGGAACCGGAATTTTGAGGGTCGTGTTCATGCCTTAACAAGAGCCAACTACCTTGCTTCACCTCCTTTAGTTGTTGCCTATGCACTTGCTGGCACGGTTAACATTGACTTTGAGAAGGAGCCTATTGGAACTGGGAAGGATGGTAAGAGTGTCTATTTTAAGGATATTTGGCCATCCACTGAAGAAGTTGCTCAGGCTGTTCAATCCAGTGTCTTGCCAGATATGTTCAGAAGCACTTACCAGGCTATTACAAAGGGCAATCCCATGTGGAATCAGCTATCAGTGCCAGCGTCCACAATGTACTCCTGGGACCCCAACTCAACCTACATTCACGAGCCTCCATACTTCAAGAACATGACCATGGAGCCTCCTGGCGCCCACGGTGTAAAGGATGCCTACTGCTTGCTGAACTTTGGTGACAGTATCACCACTGATCACATTTCTCCAGCAGGAAGCATCCACAAGGACAGTCCTGCTGCAAAATACCTACTAGAACGTGGGGTGGAGCGCAAGGACTTCAATTCTTATGGAAGTCGTCGTGGTAATGATGAAGTGATGGCTAGGGGAACTTTTGCTAACATCCGCCTTGTGAACAAGCTATTGAATGGGGAAGTTGGCCCAAAGACAATACACGTCCCCACAGGAGAAAAACTCTATGTTTTTGATGCAGCAATGAGGTACAAGGAAGCAGGACTTGGCACCATTGTTATAGCTGGAGCTGAATATGGAAGTGGTAGCTCCCGAGATTGGGCTGCAAAAGGTCCACTGCTATTGGGAGTGAAAGCAGTAATTGCCAAAAGTTTTGAGAGAATCCACCGTAGCAATTTGGTAGGAATGGGCATCATCCCACTTTGTTTCAAGTCTGGTGAGGATGCAGACACACTAGGTTTGACCGGTCACGAGCGATATACCATTGATCTTCCAAGTGACATAAGTGAAATTAGGCCTGGCCAAGATGTGACAGTCACAACTGACAACGGCAAGTCTTTTACCTGCACTCTCCGCTTCGACACTGAGGTTGAATTGGCTTACTTCAACAATGGTGGTATTCTTCCTTATGTTATTAGAAACTTGATTAAGCAGTAG
Protein:  
MYITASSSVSSSLLRAASSYSRSRFFTSSFRNLTSNTPASPSVVGQYRSLSTAAFRSFHGSVPRWSHRLDWRSPVSLRAQIRTVSPAIERLERKFSTMASEHPFKAVLTSLPKPGGGEFGKFYSLPALNDPRIDKLPYSIRILLESAVRNCDNFQVKKEDVEKIIDWANTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDTSKINPLVPVDLVIDHSVQVDVTRSENAVQANMELEFQRNKERFSFLKWGSTAFHNMLVVPPGSGIVHQVNLEYLGRLVFNTDGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLKNGVTATDLVLTVTQMLRKHGVVGKFVEFYGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDDTVAMIEAYLRANKMFVDYSEGFAVPKEAQDRVAKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAWELDESVAAAISENDILAAAVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGTVNIDFEKEPIGTGKDGKSVYFKDIWPSTEEVAQAVQSSVLPDMFRSTYQAITKGNPMWNQLSVPASTMYSWDPNSTYIHEPPYFKNMTMEPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVERKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTIHVPTGEKLYVFDAAMRYKEAGLGTIVIAGAEYGSGSSRDWAAKGPLLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIDLPSDISEIRPGQDVTVTTDNGKSFTCTLRFDTEVELAYFNNGGILPYVIRNLIKQ